CpG and UpA dinucleotides in both coding and non-coding regions of echovirus 7 inhibit replication initiation post-entry Jelke J. Fros, Isabelle Dietrich, Kinda Alshaikhahmed, Tim C. Passchier, David John Evans, Peter Simmonds
eLife 2017 vol.6

Attenuation of dengue (and other RNA viruses) with codon pair recoding can be explained by increased CpG/UpA dinucleotide frequencies Peter Simmonds, David John Evans, Martin Denis Ryan
Proceedings of the National Academy of Sciences of the United States of America 2015 vol.112 pp.E3633-E3634

RNA virus attenuation by codon pair deoptimisation is an artefact of increases in CpG/UpA dinucleotide frequencies N. J. Atkinson, David John Evans, Martin Denis Ryan, P. Simmonds
eLife 2014 vol.3

The influence of CpG and UpA dinucleotide frequencies on RNA virus replication and characterization of the innate cellular pathways underlying virus attenuation and enhanced replication Nicky J. Atkinson, Jeroen Witteveldt, David John Evans, Peter Simmonds
Nucleic Acids Research 2014 vol.42 pp.4527-4545